Allies

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Ship Allies are unique artifacts that can join your ship similar to the way a crew member would, however each one must be acquired through missions or another source. Each Ally requires 0 deck and has different bonuses depending on their type and rank, typically starting with 2 stats at rank 1 and increasing to 5 stats at rank 100. An ally will typically gain a new attribute or stat at Rank 30, 60, and 100.

It was originally believed that each ship was only able to equip two allies, but as of October 15th 2012, the text that said, 'Limit 2 per Ship' was removed along with the restriction, and you can have more than two allies.

Ships / Allies

Name	Type	Gained From	Ranks Up By
Anubix, AI Assault Drone	Mechanical	Collective Theory Lab	Successfully Raiding a Base (Level 5 or higher).
Apparitious, Bane Familiar	Familiar	Artifact Market for 90 Galaxy Points (Limited Item - Hallowe'en 2012, 2013)	Invading a planet that has been in your planet list for 48 hours or less.
Bainar, Systems Cracker	Hacker	Battle Market for 300 Blue Badges, also requires 900 Medal Points to unlock.	Using Bainar's 'Training' Ability (10 Blue Badges)
Cuniculus, Lepus Adjutant	Biomech	Artifact Market for 126 Galaxy Points (Limited Item - Easter 2014)	Using its Biomech Adaptation ability (Costs 15 Dark Badges and 250 Energy)
Kriell, Tejiar Commander	Tejiar	Raix Market for 52 Raix, also requires 1200 Medal Points to unlock.	Complete the The Tejiar Reformation daily mission
Sehrin, Bioship Ally	Biological	A Destiny Unrestrained, the final mission in the Voliir chain.	Completing a Daily Mission.
Solynia, Technician Elite	Tech	Nostalgic Voyage Medal - collecting a daily reward after playing the game for 3 years.	Colonizing a planet at least large in size
Thraccti, Scruuge Defector	Pirate	Artifact Market for 130 Galaxy Points (Limited Item - Christmas 2013)	Using its Loyalty ability (Costs 5 Yellow Badges and 250 Energy)
Trovar Zane, Elite Tracer	Tracer	The Alarri Transaction, the final mission in the Alarri chain	Alerting a planet that has been in your scan database for under twelve hours.
Vortov, Hired Mercenary	Mercenary	Mission Market for 48 Relic Badges, also requires 700 Medal Points to unlock.	Mercenary Payment (Mission Market for 2 Relic Badges (requires 800 Medal Points))